STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLF3Kruppel like factor 3. (350 aa)    
Predicted Functional Partners:
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 
 0.566
LOC100705840
GATA binding protein 2a.
    
 0.557
loxl3
Lysyl oxidase-like 3b.
    
 0.517
optn
Optineurin.
    
 0.510
LOC100704872
Cyclin dependent kinase 17.
    
 0.504
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.493
pgm2
Phosphoglucomutase 2.
    
 
 0.482
LOC100690481
TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1.
 
    
 0.482
sertad1
Si:dkey-177p2.6.
     
 0.481
ncapg
Non-SMC condensin I complex, subunit G.
    
 
 0.480
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.