STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT222Keratin-like protein KRT222 isoform X1. (543 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.787
LOC100702817
Keratin 8; Belongs to the intermediate filament family.
   
0.531
LOC100692890
RAN binding protein 2.
   
 0.527
LOC100702519
Zgc:158846; Belongs to the intermediate filament family.
   
0.494
tcf20
Transcription factor 20 isoform X1.
  
  0.446
rbbp5
Retinoblastoma binding protein 5.
    
 0.445
Tep1
Telomerase protein component 1 isoform X1.
   
 0.441
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.440
LOC102079717
NHS-like protein 1 isoform X4.
  
 
  0.427
LOC102078834
Zinc finger protein 827.
  
 
  0.424
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.