Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JR39_ORENIUncharacterized protein. (514 aa)    
Predicted Functional Partners:
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 
 0.863
cars1
Cysteinyl-tRNA synthetase.
    
   0.761
cebpg
CCAAT enhancer binding protein gamma.
    
   0.757
LOC100694205
MLLT3 super elongation complex subunit.
    
 
 0.671
I3JUU4_ORENI
MLLT1 super elongation complex subunit a.
    
 
 0.671
Vars
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.669
Eef1g
Eukaryotic translation elongation factor 1 gamma.
    
   0.669
creb5
cAMP responsive element binding protein 5b.
    
   0.659
eef1b2
Eukaryotic translation elongation factor 1 beta 2; Belongs to the EF-1-beta/EF-1-delta family.
    
   0.644
yeats4
YEATS domain containing 4.
    
 
 0.602
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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