Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100701229Tetraspanin. (249 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
    
 0.751
LOC100700260
Proline rich Gla (G-carboxyglutamic acid) 1.
    
 
 0.488
Gria2
Glutamate receptor, ionotropic, AMPA 2b.
   
 0.486
glur2a
Uncharacterized protein.
   
 0.486
tspan31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.469
Gpm6a
Glycoprotein M6Aa.
   
  
 0.458
GPM6A
Glycoprotein M6Ab.
   
  
 0.458
nf2
Neurofibromin 2a (merlin).
    
 
 0.450
LOC100697642
Neurofibromin 2b (merlin).
    
 
 0.450
ggcx
Gamma-glutamyl carboxylase.
    
   0.445
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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