STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd49Ankyrin repeat domain 49. (229 aa)    
Predicted Functional Partners:
LOC100712111
TPR_REGION domain-containing protein.
    
 0.788
trit1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
   
  
 0.589
msantd4
Myb/SANT-like DNA-binding domain-containing protein 4.
    
 0.587
slc25a19
Solute carrier family 25 member 19; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.581
LOC106097129
Family with sequence similarity 110 member B.
      
 0.578
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
  
    0.556
rfxank
Regulatory factor X-associated ankyrin-containing protein.
  
    0.535
LOC100700796
Ankyrin repeat and SOCS box protein 14.
  
     0.503
ENSONIP00000068189
KN motif and ankyrin repeat domain-containing protein 4 isoform X1.
  
     0.501
LOC109194384
Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).
  
     0.491
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.