STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trpm2Transient receptor potential cation channel, subfamily M, member 2. (1441 aa)    
Predicted Functional Partners:
trpa1
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.816
LOC100691524
Polycystic kidney disease 1 like 2a.
      
 0.702
ENSONIP00000066542
annotation not available
      
 0.702
mcoln2
Mucolipin 2.
     
 0.597
MCOLN3
Mucolipin 3.
     
 0.597
LOC100697794
Mucolipin 1a.
     
 0.597
LOC100708610
Mucolipin 1b.
     
 0.597
LOC100693840
Mucolipin 3a.
     
 0.597
I3IYP5_ORENI
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.539
ENSONIP00000032610
annotation not available
     
 0.539
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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