STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709810Uncharacterized protein. (951 aa)    
Predicted Functional Partners:
ENSONIP00000000682
Intersectin 2a.
   
0.790
I3KKD0_ORENI
Intersectin 2b.
   
0.790
itsn1
Intersectin 1 (SH3 domain protein).
   
0.709
LOC100711529
Growth arrest specific 7.
    
 0.553
LOC100706459
Growth arrest-specific 7a.
    
 0.553
ENSONIP00000000352
TSEN2 tRNA splicing endonuclease subunit.
    
   0.524
LOC100711937
WASP like actin nucleation promoting factor a.
   
 0.509
I3K140_ORENI
WASP like actin nucleation promoting factor b.
   
 0.509
ENSONIP00000016270
Si:ch211-1o7.3.
   
 0.509
was
Uncharacterized protein.
   
 0.509
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.