STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691279Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (216 aa)    
Predicted Functional Partners:
SRC
Tyrosine-protein kinase.
    
 0.920
LOC100692677
Tyrosine-protein kinase.
    
 0.920
itgb1
Integrin beta; Belongs to the integrin beta chain family.
     
 0.689
Itgb8
Integrin beta; Belongs to the integrin beta chain family.
     
 0.689
LOC100692535
Integrin beta; Belongs to the integrin beta chain family.
     
 0.689
itgb3
Integrin beta; Belongs to the integrin beta chain family.
     
 0.689
LOC100699105
Integrin beta; Belongs to the integrin beta chain family.
     
 0.689
Itgb5
Integrin beta; Belongs to the integrin beta chain family.
     
 0.689
LOC100690677
Caveolae associated protein 1b.
   
 0.576
LOC100703963
Caveolae associated protein 1a.
   
 0.565
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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