Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem106cTransmembrane protein 106C. (282 aa)    
Predicted Functional Partners:
tmem106b
Transmembrane protein 106Ba.
    
 
 0.758
tmem117
Transmembrane protein 117.
      
 0.718
marchf4
Membrane-associated ring finger (C3HC4) 4.
      
 0.717
C11orf96
Uncharacterized protein C11orf96 homolog.
      
 0.708
ENSONIP00000079948
Uncharacterized protein LOC109194435 isoform X1.
    
  0.618
lg7h12orf4
Zgc:154077.
      
 0.596
tmco3
Transmembrane and coiled-coil domains 3.
      
 0.595
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.492
ube2t
Ubiquitin-conjugating enzyme E2T (putative).
   
  
 0.468
mcrs1
Microspherule protein 1.
    
 0.466
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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