Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100693318Uncharacterized protein. (1090 aa)    
Predicted Functional Partners:
I3J2P4_ORENI
Diaphanous-related formin 2.
    
 0.707
cdc42
Cell division cycle 42.
   
 0.684
NPHP4
Uncharacterized protein.
    
 0.683
ENSONIP00000052240
annotation not available
    
 0.683
daam1
Dishevelled associated activator of morphogenesis 1b.
   
 0.607
LOC100694327
Dishevelled associated activator of morphogenesis 2.
   
 0.607
I3J5A5_ORENI
Diaphanous-related formin 3.
    
 0.573
DIAPH1
Diaphanous related formin 1.
    
 0.573
flcn
Folliculin.
    
 
 0.567
ENSONIP00000038419
Profilin-2 isoform X2.
    
 0.533
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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