close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100693318Uncharacterized protein. (1090 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
   
 0.797
NPHP4
Uncharacterized protein.
    
 0.660
ENSONIP00000052240
annotation not available
    
 0.660
LOC100705444
Uncharacterized protein.
   
 0.610
LOC100705703
Uncharacterized protein.
   
 0.610
ENSONIP00000048570
annotation not available
   
 0.610
LOC100696557
Uncharacterized protein.
   
 0.610
LOC100712562
Uncharacterized protein.
   
 0.610
I3JIW9_ORENI
Uncharacterized protein.
   
 0.610
RAC2
Rac family small GTPase 2.
   
 0.579
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.