Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Shtn1Shootin 1. (331 aa)    
Predicted Functional Partners:
rufy3
RUN and FYVE domain containing 3.
      
 0.860
LOC100706542
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.642
edem3
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.642
ajap1
Adherens junctions associated protein 1.
      
 0.608
mboat1
Membrane bound O-acyltransferase domain containing 1; Belongs to the membrane-bound acyltransferase family.
    
 
 0.595
LURAP1L
Leucine rich adaptor protein 1 like.
    
   0.593
psat1
Phosphoserine aminotransferase.
    
   0.571
abca3
ATP-binding cassette, sub-family A (ABC1), member 3b.
    
 
 0.553
I3KW61_ORENI
Transforming, acidic coiled-coil containing protein 3.
    
 0.549
nfasc
Neurofascin homolog (chicken) a.
    
 0.513
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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