STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Shtn1Shootin 1. (331 aa)    
Predicted Functional Partners:
rufy3
RUN and FYVE domain containing 3.
     
 0.645
mboat1
Membrane bound O-acyltransferase domain containing 1; Belongs to the membrane-bound acyltransferase family.
    
 
 0.580
nfasc
Neurofascin homolog (chicken) a.
    
 0.475
LOC100712012
Uncharacterized protein.
    
 0.475
l1cam
L1 cell adhesion molecule, paralog a.
    
 0.475
LOC100702893
Uncharacterized protein.
    
 0.475
LOC100707557
Neuronal cell adhesion molecule a.
    
 0.475
chl1
Cell adhesion molecule L1-like b.
    
 0.475
NRCAM
Uncharacterized protein.
    
 0.475
LOC100706542
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.468
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.