Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695310Carbohydrate sulfotransferase. (339 aa)    
Predicted Functional Partners:
Chst11
Carbohydrate sulfotransferase.
     
  0.836
Chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.821
chst12
Carbohydrate sulfotransferase.
     
  0.630
LOC100699819
Carbohydrate sulfotransferase.
     
  0.630
csgalnact2
Hexosyltransferase.
     
 0.623
CHST15
Carbohydrate sulfotransferase 15.
      
 0.621
LOC100705826
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.542
LOC100706438
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.522
DSEL
Dermatan sulfate epimerase like a.
      
 0.521
LOC100712318
Hyaluronan and proteoglycan link protein 2.
   
  
 0.507
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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