STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100711350Clusterin; Belongs to the clusterin family. (463 aa)    
Predicted Functional Partners:
c5
Uncharacterized protein.
   
 
 0.626
LOC100699941
Putative apolipoprotein E.
   
  
 0.599
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.587
c8b
Complement component 8, beta polypeptide.
    
 0.523
APP
Amyloid beta precursor protein.
   
 0.506
LOC100709268
Amyloid beta (A4) precursor protein b.
   
 0.506
aplp2
Amyloid beta (A4) precursor-like protein 2.
   
 0.452
LOC100707019
Uncharacterized protein.
   
  
 0.451
vtn
Vitronectin a.
   
 
 0.436
LOC100692624
Vitronectin b.
   
 
 0.436
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.