Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc66a1Solute carrier family 66 member 1. (309 aa)    
Predicted Functional Partners:
slc66a1l
Uncharacterized protein.
     
 0.920
dus2
Dihydrouridine synthase 2.
 
 
    0.821
slc38a9
Solute carrier family 38 member 9.
      
 0.754
ctns
Cystinosin, lysosomal cystine transporter.
   
 
 0.726
wdr41
WD repeat domain 41.
      
 0.678
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
      
 0.620
unc50
Unc-50 homolog (C. elegans).
      
 0.601
ebna1bp2
EBNA1 binding protein 2.
   
  
 0.584
snx17
Sorting nexin 17.
      
 0.558
Elp2
Elongator acetyltransferase complex subunit 2.
     
 0.555
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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