Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rell1RELT like 1. (255 aa)    
Predicted Functional Partners:
drg2
Developmentally regulated GTP binding protein 2.
   
 0.929
LOC100691030
Uncharacterized protein LOC100691030.
     
  0.916
relt
RELT TNF receptor.
     
  0.916
drg1
Developmentally regulated GTP binding protein 1.
   
 0.886
ARHGEF17
Rho guanine nucleotide exchange factor (GEF) 17.
     
  0.795
mrpl47
Mitochondrial ribosomal protein L47.
   
  
 0.785
itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.755
gcn1
GCN1 activator of EIF2AK4.
    
 
 0.721
esf1
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
   
   0.677
LOC100703440
BTB (POZ) domain containing 11b.
      
 0.612
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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