Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
utp18WD_REPEATS_REGION domain-containing protein. (531 aa)    
Predicted Functional Partners:
tbl3
Transducin (beta)-like 3.
   
 0.999
LOC100706520
PWP2 small subunit processome component.
   
 0.999
wdr36
WD repeat domain 36.
   
 0.999
wdr3
WD repeat domain 3.
   
 0.999
utp6
UTP6 small subunit processome component.
   
 0.999
utp4
UTP4 small subunit processome component.
   
 0.998
utp15
UTP15 small subunit processome component.
  
 0.998
wdr46
WD repeat domain 46.
   
 0.998
wdr43
WD repeat domain 43.
   
 0.998
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 0.998
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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