STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
man2b2Alpha-mannosidase. (1009 aa)    
Predicted Functional Partners:
man2c1
Mannosidase, alpha, class 2C, member 1.
     
 0.940
man2b1
Alpha-mannosidase.
     
 
0.900
LOC100711838
Guanine nucleotide-binding protein subunit alpha-14 isoform X1.
      
 0.571
manba
Mannosidase, beta A, lysosomal.
   
 
 0.524
gla
Alpha-galactosidase.
   
 
 0.457
naga
Alpha-galactosidase.
   
 
 0.457
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
      
 0.449
hspa13
Heat shock protein 70 family, member 13.
    
 
 0.446
LOC100689844
Battenin.
      
 0.432
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.