Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
I3JS28_ORENINuclear receptor subfamily 1, group d, member 1. (552 aa)    
Predicted Functional Partners:
LOC100691220
Neuronal PAS domain protein 2.
    
 0.968
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
    
 0.962
LOC100711812
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
 0.946
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.946
I3JJ43_ORENI
D site albumin promoter binding protein a.
   
 0.926
LOC100698155
D site albumin promoter binding protein b.
   
 0.926
LOC100703460
Clock circadian regulator b.
    
 0.922
ncor2
Nuclear receptor corepressor 2.
    
 0.918
ncor1
Nuclear receptor corepressor 1.
    
 0.918
LOC100709350
Cryptochrome circadian regulator 2.
     
 0.910
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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