Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ift22Intraflagellar transport 22 homolog (Chlamydomonas). (185 aa)    
Predicted Functional Partners:
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
   
 0.999
ift74
Intraflagellar transport 74.
    
 0.999
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
    
 0.998
Ift46
Intraflagellar transport 46 homolog (Chlamydomonas).
    
 0.998
I3KF91_ORENI
Intraflagellar transport 88 homolog.
    
 0.998
ift81
Intraflagellar transport 81 homolog.
   
 0.998
ift172
Intraflagellar transport 172.
   
 0.997
hspb11
Zgc:158640.
   
 0.997
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.996
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
   
 0.996
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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