Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JSD3_ORENIUncharacterized protein. (420 aa)    
Predicted Functional Partners:
rab27b
RAB27B, member RAS oncogene family.
    
 
 0.516
LOC100706684
Uncharacterized protein.
    
 
 0.516
rab27a
RAB27A, member RAS oncogene family.
    
 
 0.516
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.499
Cebpz
CCAAT enhancer binding protein zeta.
    
 
 0.457
sez6l2
Seizure related 6 homolog (mouse)-like 2.
   
  
 0.454
LOC100703329
RAB3D, member RAS oncogene family, b.
   
 
 0.448
LOC100694171
RAB3B, member RAS oncogene family.
   
 
 0.448
rab3a
RAB3A, member RAS oncogene family, b.
   
 
 0.448
rab3c
RAB3C, member RAS oncogene family.
   
 
 0.448
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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