Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sgf29SAGA complex associated factor 29. (290 aa)    
Predicted Functional Partners:
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.998
tada2a
Transcriptional adapter.
    
 0.998
yeats2
YEATS domain containing 2.
   
 0.997
tada2b
Transcriptional adapter.
    
 0.997
kat14
Lysine acetyltransferase 14.
   
 0.996
supt20h
SPT20 homolog, SAGA complex component.
    
 0.996
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.996
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.996
Zzz3
Zinc finger, ZZ-type containing 3.
    
 0.995
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.995
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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