Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100692100Ig-like domain-containing protein. (392 aa)    
Predicted Functional Partners:
cenpj
Centromere protein J.
      
 0.636
ofd1
OFD1 centriole and centriolar satellite protein.
      
 0.608
aspm
Abnormal spindle-like microcephaly-associated protein isoform X1.
      
 0.577
Med12
Mediator complex subunit 12.
      
 0.560
Mcph1
Microcephalin 1.
      
 0.504
ENSONIP00000054390
annotation not available
      
 0.504
LOC100696665
Proteolipid protein 1b.
   
  
 0.463
ENSONIP00000068708
Myelin proteolipid protein isoform X1.
   
  
 0.463
Mdn1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
      
 0.462
spred1
Sprouty related EVH1 domain containing 1.
      
 0.449
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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