STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705403Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca. (1415 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.811
LOC100693503
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.811
LOC100690173
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
0.793
LOC100534577
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
0.793
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.610
LOC100698346
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2.
   
 0.543
ENSONIP00000050900
Calcium/calmodulin-dependent protein kinase II alpha.
   
 0.543
LOC100695450
Calcium/calmodulin-dependent protein kinase type II delta 1 chain.
   
 0.543
LOC100695100
Calcium/calmodulin dependent protein kinase II beta.
   
 0.543
grin3b
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb.
    
0.541
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.