Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
I3JT13_ORENIMyosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2181 aa)    
Predicted Functional Partners:
ush1c
USH1 protein network component harmonin.
   
 0.786
Cdh23
Cadherin-related 23.
    
 0.756
ADAMTS20
ADAM metallopeptidase with thrombospondin type 1 motif 20.
      
 0.708
LOC100697819
Cyclic nucleotide-binding domain-containing protein.
      
 0.700
I3K581_ORENI
Whirlin a.
    
 0.658
LOC100690328
Whirlin isoform X1.
    
 0.658
LOC100711096
Somatolactin alpha.
      
 0.644
LOC100701022
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.642
LOC100696636
Usher syndrome 1Ga (autosomal recessive).
   
 0.619
LOC100698861
Usher syndrome 1Gb (autosomal recessive).
   
 0.619
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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