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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pctpPhosphatidylcholine transfer protein. (213 aa)    
Predicted Functional Partners:
acot13
Acyl-CoA thioesterase 13.
    
 
 0.624
stard5
StAR-related lipid transfer (START) domain containing 5.
   
  
 0.602
stard3
StAR-related lipid transfer (START) domain containing 3.
      
 0.593
LOC100711791
StAR-related lipid transfer (START) domain containing 15.
      
0.568
stxbp4
Syntaxin binding protein 4.
      
 0.442
star
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
      
 0.442
acot9
Acyl-CoA thioesterase 9, tandem duplicate 2.
      
 0.435
LOC100710690
Histone PARylation factor 1.
      
 0.430
I3J1K3_ORENI
GRAM domain containing 1A.
      
 0.426
I3J3Q8_ORENI
Lysophosphatidylcholine acyltransferase 2.
     
 0.417
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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