Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100704864Forkhead box K2. (609 aa)    
Predicted Functional Partners:
Foxk1
Forkhead box K1.
     
  0.916
LOC100708764
Uncharacterized protein.
     
  0.916
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.903
LOC100697408
ASXL transcriptional regulator 2.
    
 0.888
I3K0K7_ORENI
ASXL transcriptional regulator 1.
   
 0.798
hcfc2
Host cell factor C2.
    
 0.747
I3KWS6_ORENI
Host cell factor C1a.
    
 0.747
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.737
KDM1B
Lysine demethylase 1B.
   
 0.733
mbd5
Methyl-CpG binding domain protein 5.
    
 0.666
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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