Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102080585Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (559 aa)    
Predicted Functional Partners:
htt
Huntingtin.
    
 
 0.618
nat8l
N-acetyltransferase 8-like.
      
 0.567
Vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
   0.494
bub3
BUB3 mitotic checkpoint protein.
      
 0.443
zdhhc4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.420
LOC102078694
Vacuolar protein 8 isoform X1.
   
  
 0.420
zdhhc6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.414
zdhhc24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.408
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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