STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697186Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (270 aa)    
Predicted Functional Partners:
LOC109202395
Small ubiquitin-related modifier 2.
    
 0.700
LOC100690637
Small ubiquitin-related modifier.
    
 0.700
sumo2
Small ubiquitin-related modifier.
    
 0.700
ENSONIP00000064374
Small ubiquitin-related modifier 2.
    
 0.700
LOC100709166
Small ubiquitin-related modifier.
    
 0.700
sumo1
Small ubiquitin-related modifier.
    
 0.700
LOC100703924
Aquaporin 3 (Gill blood group); Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.625
tex10
Testis expressed 10.
    
 0.606
LOC100708900
Si:dkey-21c19.3.
    
 0.562
I3JX89_ORENI
ULP_PROTEASE domain-containing protein.
    
 0.562
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.