Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem72Transmembrane protein 72. (250 aa)    
Predicted Functional Partners:
heatr6
HEAT repeat containing 6.
      
 0.894
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.628
rnf181
RING-type domain-containing protein.
      
 0.625
rdm1
RRM domain-containing protein.
      
 0.576
LOC100700538
Zgc:153738.
      
 0.574
tmem267
Transmembrane protein 267.
      
 0.555
I3KEM2_ORENI
Solute carrier family 25 member 22a; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.513
LOC100696012
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.513
I3JVT1_ORENI
Solute carrier family 25 member 18; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.513
LOC100695863
Solute carrier family 25 member 55a; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.513
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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