Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100690986Si:dkey-275b16.2. (556 aa)    
Predicted Functional Partners:
sms
Spermine synthase.
     
 0.911
srm
Exosome component 10; Belongs to the spermidine/spermine synthase family.
     
 0.849
tysnd1
Serine protease; Belongs to the peptidase S1B family.
     
 0.677
aoc1
Amine oxidase.
     
 0.650
LOC100705916
Amine oxidase.
     
 0.650
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
     
 0.637
LOC100695172
Spermidine/spermine N1-acetyltransferase family member 2b.
      
 0.615
Amd1
S-adenosylmethionine decarboxylase proenzyme.
      
 0.609
LOC100706625
Amine oxidase.
  
  
 0.592
LOC100703463
Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family.
     
  0.575
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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