STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100690986Si:dkey-275b16.2. (556 aa)    
Predicted Functional Partners:
LOC102079225
Peroxisomal N(1)-acetyl-spermine/spermidine oxidase.
  
  
 
0.901
tysnd1
Serine protease; Belongs to the peptidase S1B family.
     
 0.606
ENSONIP00000061996
annotation not available
    
  0.587
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.587
LOC100698399
Non-specific lipid-transfer protein.
   
 
 0.572
LOC100711328
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.566
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.560
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.541
pex10
Peroxisomal biogenesis factor 10.
     
 0.539
Pex14
Peroxisomal biogenesis factor 14.
     
 0.538
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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