STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sharpinRanBP2-type domain-containing protein. (436 aa)    
Predicted Functional Partners:
otulin
Uncharacterized protein.
    
 0.998
rbck1
RanBP-type and C3HC4-type zinc finger containing 1.
   
0.998
LOC100708611
Sharpin and rbck1 related.
  
0.998
ENSONIP00000060526
Si:dkey-181m9.8.
    
 0.993
ENSONIP00000008001
E3 ubiquitin-protein ligase RNF31 isoform X1.
    
 0.989
LOC100707250
Uncharacterized protein.
    
 0.989
I3K566_ORENI
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.987
LOC100534578
Tumor necrosis factor b (TNF superfamily, member 2).
    
 0.986
LOC100705328
Baculoviral IAP repeat containing 2.
   
 0.963
I3KLZ9_ORENI
X-linked inhibitor of apoptosis.
   
 0.953
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.