Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wrnip1WRN helicase interacting protein 1. (604 aa)    
Predicted Functional Partners:
LOC100534578
Tumor necrosis factor b (TNF superfamily, member 2).
    
   0.921
oxtr
RAD18 E3 ubiquitin protein ligase.
    
 
 0.911
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.898
blm
BLM RecQ like helicase.
  
 
 0.856
ENSONIP00000024927
RecQ helicase-like 4.
  
 
 0.856
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 
 0.853
ENSONIP00000008001
E3 ubiquitin-protein ligase RNF31 isoform X1.
    
 
 0.851
LOC100707250
Uncharacterized protein.
    
 
 0.851
ENSONIP00000060526
Si:dkey-181m9.8.
    
 
 0.828
dna2
DNA replication helicase/nuclease 2.
   
 
 0.821
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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