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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3Coagulation factor IIIa. (298 aa)    
Predicted Functional Partners:
ENSONIP00000044867
LOW QUALITY PROTEIN: coagulation factor VII-like.
    
 0.700
ENSONIP00000068171
annotation not available
    
 0.700
ENSONIP00000069223
Coagulation factor VII.
    
 0.700
LOC112844144
Tissue factor pathway inhibitor.
     
 0.695
LOC100704957
Coagulation factor IXa.
    
 0.667
LOC100710669
Coagulation factor IXb.
    
 0.667
LOC100702313
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.658
LOC100704738
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.649
ENSONIP00000081123
Coagulation factor VII, like.
    
 0.649
eprs1
Glutamyl-prolyl-tRNA synthetase.
      
 0.636
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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