STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707266Uncharacterized protein. (330 aa)    
Predicted Functional Partners:
tlcd1
TLC domain containing 1.
    
 
 0.666
LOC100690032
Zgc:158868; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.603
LOC100694465
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.558
LOC100534432
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.557
akip1
A kinase (PRKA) interacting protein 1.
      
 0.544
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.535
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.535
LOC100699208
Retinol dehydrogenase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.528
Rdh12
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.522
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.514
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.