STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100689819Oxysterol-binding protein; Belongs to the OSBP family. (879 aa)    
Predicted Functional Partners:
LOC100701210
G protein-coupled receptor 89B.
 
      0.809
LOC100693338
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.598
LOC100702699
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
 
    
 0.556
Slc22a18
Solute carrier family 22 member 18.
   
  
 0.554
gm2a
GM2 ganglioside activator.
      
 0.502
utp20
UTP20 small subunit processome component.
   
  
 0.488
sptlc1
Serine palmitoyltransferase, long chain base subunit 1.
      
 0.474
phlda2
Pleckstrin homology-like domain, family A, member 2.
      
 0.465
arl15
ADP-ribosylation factor-like protein 15 isoform X4.
   
 0.465
cars1
Cysteinyl-tRNA synthetase.
 
 
  
 0.462
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.