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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (579 aa)    
Predicted Functional Partners:
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.969
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 0.953
LOC100703030
Translocase of outer mitochondrial membrane 20b.
   
 0.953
ENSONIP00000036944
annotation not available
   
 0.952
TOMM7
Mitochondrial import receptor subunit TOM7 homolog.
    
 0.930
LOC100709473
Zgc:109986.
   
 0.902
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
    
 0.899
LOC100696843
Translocase of outer mitochondrial membrane 40 homolog (yeast).
    
 0.899
LOC100691366
Translocase of outer mitochondrial membrane 40 homolog, like.
    
 0.899
LOC100707887
Mitochondrial import receptor subunit TOM5 homolog isoform X2.
     
 0.889
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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