Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl31Kelch-like family member 31. (635 aa)    
Predicted Functional Partners:
tmem161a
Transmembrane protein 161A.
      
 0.756
Tmem70
Transmembrane protein 70.
      
 0.755
tmem214
Transmembrane protein 214.
      
 0.749
tmem38a
Transmembrane protein 38A.
   
  
 0.734
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
  
 0.721
ntmt1
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
   
  
 0.700
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.699
LOC109194151
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.699
klhl22
Kelch-like family member 22.
    
 0.690
tdrd3
Tudor domain containing 3.
      
 0.678
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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