STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696598Elongin A, like. (627 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.989
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.969
I3JU14_ORENI
Elongin B.
    
 0.889
elob
Ubiquitin-like domain-containing protein.
    
 0.889
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.842
rpl18
60S ribosomal protein L18; Component of the large ribosomal subunit.
   
   0.836
rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
 
 0.835
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.832
rpl30
Ribosomal protein L30.
    
   0.829
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.829
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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