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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000012226Granulin a. (1456 aa)    
Predicted Functional Partners:
cs
Citrate synthase; Belongs to the citrate synthase family.
   
   0.535
lg7h15orf40
Zgc:193812.
    
   0.524
lg7hxorf56
Zgc:103697.
    
   0.524
drg1
Developmentally regulated GTP binding protein 1.
    
   0.524
pole2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.524
drg2
Developmentally regulated GTP binding protein 2.
    
   0.506
crnkl1
Crooked neck pre-mRNA splicing factor 1.
      
 0.482
I3KB22_ORENI
Secretory calcium-binding phosphoprotein 5.
      
 0.480
LOC100692652
Glutamine-fructose-6-phosphate transaminase 2.
      
 0.480
ptgfr
Prostaglandin F receptor (FP); Belongs to the G-protein coupled receptor 1 family.
      
 0.476
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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