STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100711823Amino acid transporter. (668 aa)    
Predicted Functional Partners:
Slc3a1
Solute carrier family 3 member 1.
   
 
 0.601
slc7a9
Solute carrier family 7 member 9.
   
  
 0.593
LOC100691459
Solute carrier family 15 member 1a.
   
 
 0.564
LOC100690844
Solute carrier family 7 member 7.
   
  
 0.508
LOC100693734
Solute carrier family 38 member 4.
    
 
 0.508
Slc7a5
Solute carrier family 7 member 5.
   
  
 0.500
SLC2A6
Solute carrier family 2 member 6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.475
slc38a9
Solute carrier family 38 member 9.
    
 
 0.469
cltrn
Si:dkey-194e6.1.
      
 0.462
LOC100692028
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
  
 0.459
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.