I3JTR9_ORENI protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

I3JTR9_ORENI

Uncharacterized protein. (2882 aa)

Predicted Functional Partners:

maml1

0.942

maml2

0.906

LOC106098755

0.897

rbpj

0.897

LOC100707106

0.855

NCSTN

0.854

LOC100703553

0.846

notch1

0.846

aph1a

0.840

LOC100697735

0.825

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I3JTR9_ORENI	LOC100697735	ENSONIP00000012264	ENSONIP00000069260	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.825
I3JTR9_ORENI	LOC100703553	ENSONIP00000012264	ENSONIP00000009396	Uncharacterized protein.	Notch receptor 1a.	0.846
I3JTR9_ORENI	LOC100707106	ENSONIP00000012264	ENSONIP00000006744	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region-like.	0.855
I3JTR9_ORENI	LOC106098755	ENSONIP00000012264	ENSONIP00000032353	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.897
I3JTR9_ORENI	NCSTN	ENSONIP00000012264	ENSONIP00000035581	Uncharacterized protein.	Nicastrin.	0.854
I3JTR9_ORENI	aph1a	ENSONIP00000012264	ENSONIP00000069028	Uncharacterized protein.	APH1B gamma secretase subunit.	0.840
I3JTR9_ORENI	maml1	ENSONIP00000012264	ENSONIP00000005442	Uncharacterized protein.	Mastermind-like transcriptional coactivator 1.	0.942
I3JTR9_ORENI	maml2	ENSONIP00000012264	ENSONIP00000007216	Uncharacterized protein.	MamL-1 domain-containing protein.	0.906
I3JTR9_ORENI	notch1	ENSONIP00000012264	ENSONIP00000013435	Uncharacterized protein.	Notch receptor 1b.	0.846
I3JTR9_ORENI	rbpj	ENSONIP00000012264	ENSONIP00000046781	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region.	0.897
LOC100697735	I3JTR9_ORENI	ENSONIP00000069260	ENSONIP00000012264	Beta-1,3-N-acetylglucosaminyltransferase.	Uncharacterized protein.	0.825
LOC100697735	LOC100703553	ENSONIP00000069260	ENSONIP00000009396	Beta-1,3-N-acetylglucosaminyltransferase.	Notch receptor 1a.	0.884
LOC100697735	notch1	ENSONIP00000069260	ENSONIP00000013435	Beta-1,3-N-acetylglucosaminyltransferase.	Notch receptor 1b.	0.884
LOC100703553	I3JTR9_ORENI	ENSONIP00000009396	ENSONIP00000012264	Notch receptor 1a.	Uncharacterized protein.	0.846
LOC100703553	LOC100697735	ENSONIP00000009396	ENSONIP00000069260	Notch receptor 1a.	Beta-1,3-N-acetylglucosaminyltransferase.	0.884
LOC100703553	LOC100707106	ENSONIP00000009396	ENSONIP00000006744	Notch receptor 1a.	Recombination signal binding protein for immunoglobulin kappa J region-like.	0.918
LOC100703553	LOC106098755	ENSONIP00000009396	ENSONIP00000032353	Notch receptor 1a.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.972
LOC100703553	NCSTN	ENSONIP00000009396	ENSONIP00000035581	Notch receptor 1a.	Nicastrin.	0.960
LOC100703553	aph1a	ENSONIP00000009396	ENSONIP00000069028	Notch receptor 1a.	APH1B gamma secretase subunit.	0.916
LOC100703553	maml1	ENSONIP00000009396	ENSONIP00000005442	Notch receptor 1a.	Mastermind-like transcriptional coactivator 1.	0.993