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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JTR9_ORENIUncharacterized protein. (2882 aa)    
Predicted Functional Partners:
LOC106098755
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.800
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.800
LOC100699141
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.606
jag1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.606
LOC100710579
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.606
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.591
snw1
SNW domain containing 1.
    
 0.544
tmed2
Transmembrane p24 trafficking protein 2.
     
 0.530
rps27a
Ribosomal protein S27a.
    
  0.528
I3KW61_ORENI
Transforming, acidic coiled-coil containing protein 3.
    
  0.518
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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