• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
thbs2 protein (Oreochromis niloticus) - STRING interaction network
"thbs2" - Thrombospondin 2a in Oreochromis niloticus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thbs2Thrombospondin 2a (1185 aa)    
Predicted Functional Partners:
itgav
Integrin, alpha V (1043 aa)
     
  0.953
cd36
CD36 molecule (thrombospondin receptor); CD36 antigen; Belongs to the CD36 family (468 aa)
       
  0.951
ENSONIG00000018558
Syndecan; Cell surface proteoglycan (211 aa)
     
 
  0.948
itgb3
Integrin beta 3b (845 aa)
     
  0.945
ITGA9
Integrin, alpha 9 (1038 aa)
     
  0.926
itga8
Integrin, alpha 8 (1062 aa)
     
  0.925
itga3
Integrin, alpha 3b (1055 aa)
     
  0.921
itga11
Integrin, alpha 11a (1192 aa)
     
  0.918
ITGA7
Integrin, alpha 9 (1137 aa)
     
  0.918
itga10
Integrin, alpha 10 (1115 aa)
     
  0.916
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Oreochromis niloticus, Tilapia nilotica
Server load: low (14%) [HD]