STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gigyf2GRB10 interacting GYF protein 2. (1334 aa)    
Predicted Functional Partners:
znf598
Zinc finger protein 598.
    
 
 0.910
LOC100698984
DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.
    
 
 0.719
LOC100707815
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.719
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.719
eif4e2
Eukaryotic translation initiation factor 4E family member 2; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.704
LOC100709750
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.704
I3J1L4_ORENI
Trinucleotide repeat containing adaptor 6C1.
   
 
 0.670
tnrc6a
Trinucleotide repeat containing adaptor 6A.
   
 
 0.670
I3KNY5_ORENI
Trinucleotide repeat containing adaptor 6C2.
   
 
 0.670
LOC100699800
Eukaryotic translation initiation factor 4E family member 3; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.567
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.