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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691316Serotransferrin-like. (1021 aa)    
Predicted Functional Partners:
LOC100695592
Transferrin receptor protein 1.
  
 0.704
tfr2
Transferrin receptor 2.
  
 0.660
LOC100702695
Transferrin receptor 1b.
  
 0.651
epo
Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.
  
 0.651
LOC100534415
Hepcidin-like isoform X1.
      
 0.586
LOC109204099
Hepcidin-like.
      
 0.586
LOC100690051
Formyl peptide receptor 2.
      
 0.581
apo14kda
Apolipoprotein A-II.
   
  
 0.544
dab2
DAB adaptor protein 2.
   
 
 0.504
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.493
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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