Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d10bTBC1 domain family, member 10b. (917 aa)    
Predicted Functional Partners:
LOC100703328
Si:dkey-16l2.16.
   
 0.706
rab35
RAB35, member RAS oncogene family b.
   
 0.706
eif3a
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
   0.660
ENSONIP00000026111
ADP-ribosylation factor 6b.
   
 
 0.635
I3JAK0_ORENI
Uncharacterized protein.
     
  0.541
LOC100701038
Synaptotagmin-like protein 2 isoform X2.
     
  0.541
sytl1
Uncharacterized protein.
     
  0.541
TBC1D13
TBC1 domain family member 13.
      
 0.513
dennd6a
DENN/MADD domain containing 6Aa.
    
 
 0.505
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
   
 0.503
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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