STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXN2Forkhead box N2b. (409 aa)    
Predicted Functional Partners:
LOC100703880
F-box and WD repeat domain containing 11a.
    
 
 0.680
cops2
COP9 signalosome subunit 2.
    
 
 0.630
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
      
 0.614
foxn4
Forkhead box N4.
   
  
 0.599
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
    
 0.593
LOC100698634
Forkhead box N1.
   
  
 0.590
shprh
SNF2 histone linker PHD RING helicase.
    
 0.587
otub1
Ubiquitin thioesterase.
    
 
 0.587
foxn3
Checkpoint suppressor 1.
   
    0.576
LOC100696631
Uncharacterized protein.
    
 0.561
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.