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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thap4THAP domain containing 4. (169 aa)    
Predicted Functional Partners:
Thap7
THAP domain-containing protein 7 isoform X7.
   
  
 0.638
KCNA10
Potassium voltage-gated channel subfamily A member 10; Belongs to the potassium channel family.
      
 0.627
KCNA10-2
Potassium voltage-gated channel subfamily A member 10; Belongs to the potassium channel family.
      
 0.627
LOC100695464
Solute carrier organic anion transporter family member.
      
 0.587
SLCO1C1
Solute carrier organic anion transporter family member.
      
 0.587
thap11
THAP domain containing 11.
      
 0.583
LOC100706610
Uncharacterized protein.
      
 0.581
pemt
Phosphatidylethanolamine N-methyltransferase; Catalyzes the three sequential steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME), PMME to phosphatidyldimethylethanolamine (PDME), and PDME to phosphatidylcholine (PC); Belongs to the class VI-like SAM-binding methyltransferase superfamily. PEMT/PEM2 methyltransferase family.
      
 0.580
LOC102083227
Phosphodiesterase.
      
 0.487
PDE3A
Phosphodiesterase.
      
 0.487
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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