STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JU57_ORENIUncharacterized protein. (1316 aa)    
Predicted Functional Partners:
LOC100693633
PYD and CARD domain containing.
    
 0.640
mavs
CARD_2 domain-containing protein.
    
 0.587
brcc3
BRCA1/BRCA2-containing complex, subunit 3.
    
  0.560
I3IZ02_ORENI
Arrestin_C domain-containing protein.
    
 0.540
txnip
Thioredoxin-interacting protein.
    
 0.540
LOC100704402
NIMA-related kinase 6; Belongs to the protein kinase superfamily.
    
 0.470
nek7
NIMA-related kinase 7.
    
 0.470
LOC100707066
Interleukin-1.
   
 0.426
ENSONIP00000018453
Hemicentin-2-like isoform X1.
    
  0.404
ENSONIP00000035128
annotation not available
    
  0.404
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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