STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705478C-mer proto-oncogene tyrosine kinase a. (1198 aa)    
Predicted Functional Partners:
pros1
Protein S.
   
 0.974
gas6
Uncharacterized protein.
    
 0.967
adam10
Uncharacterized protein.
    
 0.923
LOC100695735
FANCD2 and FANCI associated nuclease 1.
    
 0.923
LOC100707598
Si:ch1073-396h14.1.
    
 0.922
LOC100700935
ADAM metallopeptidase domain 17a.
    
 0.883
LOC100692440
ADAM metallopeptidase domain 17b.
    
 0.883
LOC100699997
Zgc:174164.
    
 0.867
adam9
Disintegrin and metalloproteinase domain-containing protein 9 isoform X1.
    
 0.867
LOC100696779
SHC (Src homology 2 domain containing) transforming protein 2.
    
  0.817
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.