STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gcm2Glial cells missing transcription factor 2. (465 aa)    
Predicted Functional Partners:
Efcab10
Si:dkey-42p14.3.
   
   0.767
ENSONIP00000048499
annotation not available
   
   0.767
ENSONIP00000058414
Parathyroid hormone 1a.
   
 
 0.762
pax9
Paired box 9.
      
 0.750
LOC100698634
Forkhead box N1.
    
 
 0.743
fgfrl1
Fibroblast growth factor receptor like 1a.
   
 
 0.674
LOC100706474
Forkhead box I3b.
   
 
 0.668
sox17
SRY-box transcription factor 17.
      
 0.662
hopx
HOP homeobox.
    
 
 0.659
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.654
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.